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Intron Name: Anas_platyrhynchos_platyrhynchos_6_708678_709339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

708678 - 709339

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGCC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCGCAC

U12 Branch Point Sequence:

TCCTCCTGCACC

Flanking Amino Acid:

QAFRKFTKAERLIPASGLSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

62.1

38.4

Major BPS

51.3

0.03

1.3

63.1

35.8

Major PPT

0.45

0.7

28.9

Minor 5ss

30.8

-2.2

3.5

41.3

45.5

Minor BPS

55.4

0.15

66.78

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024045

708412 - 709643

1232