Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7106410_7113945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7106410 - 7113945

Intron Length:

7536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

TTTATCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTCTTTTATCT

Flanking Amino Acid:

VSVLDSLMSATYFNDNILTL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

68.2

38.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.9

0.67

77.2

36.9

Minor 5ss

40.9

-1

2.9

54.2

43.9

Minor BPS

0.61

1.5

84.71

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013824

7103867 - 7148988

45122