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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7139174_7142373_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7139174 - 7142373

Intron Length:

3200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

CTCTGTGCCGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

HNFPKVSILPGTPLSRADLR

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

64.9

40.8

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

0.2

1.1

59.2

Minor 5ss

37.4

-1.4

52.6

43.7

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013824

7103867 - 7148988

45122