Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_71722_71847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71722 - 71847

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTTGT

5'SS Class:

major

3'SS Sequence:

TCCCTGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CTTGCCTTGACT

Flanking Amino Acid:

NCSAKCNSHGVCNHKRMCHC

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

69.7

43.7

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

75.3

0.57

0.9

71.8

38.1

Minor 5ss

40.1

-1.1

3.2

49.2

47.1

Minor BPS

76.6

0.92

1.4

87.04

39.2

Associated Gene:

Gene:

ADAM8

Ensembl Gene ID:

ENSAPLG00000012822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013413

70406 - 83569

13164