Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_72377_72543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72377 - 72543

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCATTC

5'SS Class:

major

3'SS Sequence:

GTGCCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

TCCACATGATCC

Flanking Amino Acid:

AEQCRVLWGAAARVAPDECF

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

66.9

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

73.1

0.52

0.9

66.1

35.8

Minor 5ss

46.7

-0.3

3.2

67.6

43.7

Minor BPS

-0.4

1.9

53.16

Associated Gene:

Gene:

ADAM8

Ensembl Gene ID:

ENSAPLG00000012822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013413

70406 - 83569

13164