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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7262408_7284529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7262408 - 7284529

Intron Length:

22122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

VSVYLNRSWLGLRFLRALRL

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

1.1

0.4

13.8

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043009

7234182 - 7557853

323672

ENSAPLT00000031529

7249341 - 7557853

308513