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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7284642_7287265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7284642 - 7287265

Intron Length:

2624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

VFFLLYFGLRFIAANDKLWF

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.7

41.5

Major BPS

0.5

59.3

39.1

Major PPT

1.1

0.4

13.8

Minor 5ss

39.4

-1.2

2.9

52.3

44.3

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043009

7234182 - 7557853

323672

ENSAPLT00000031529

7249341 - 7557853

308513