Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_739105_766926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

739105 - 766926

Intron Length:

27822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCACG

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATAAAT

U12 Branch Point Sequence:

AAATGGATAAAT

Flanking Amino Acid:

VTLPFYPKSPQSKELIKEAI

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

60.4

44.4

Major BPS

56.8

0.17

1.2

65.3

38.6

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

41.9

-0.9

2.8

55.9

Minor BPS

39.8

-0.6

2.5

59.04

43.3

Associated Gene:

Gene:

PRKG1

Ensembl Gene ID:

ENSAPLG00000003140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028468

738722 - 965931

227210

ENSAPLT00000003222

738722 - 1157771

419050