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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7635321_7636036_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7635321 - 7636036

Intron Length:
716

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
ATG|GCAAGTACC

5'SS Class:
strong_major

3'SS Sequence:
TCTGTGTGCATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTATAAA

U12 Branch Point Sequence:
GCTTCTATAAAC

Flanking Amino Acid:
ISTDSIPFLDDSTSLAYQRV

Intron Amino Acid Position:
1822

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.5
0.86
1
86.6
26

Major BPS
66.3
0.4
1.1
68
34.4

Major PPT
65.4
0.35
1
60.4
40.4

Minor 5ss
26.8
-2.7
3.6
35.1
34.5

Minor BPS
55.2
0.14
1.7
65.33
40

Associated Gene:

Gene:
DLG5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7629889 - 7735803
105915

7629889 - 7735803
105915