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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7637519_7637831_R


Intron Information:

Intron Rank:
26

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7637519 - 7637831

Intron Length:
313

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATTTGAG

5'SS Class:
major

3'SS Sequence:
TCTTCCTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
GATTATTTATGT

Flanking Amino Acid:
KELPGDGFYIRALYDRLAEV

Intron Amino Acid Position:
1699

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1
66.9
38.5

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
88.4
0.86
0.7
80.6
31.4

Minor 5ss
38.2
-1.3
3.1
48.8
47.4

Minor BPS
47.6
-0.1
2
66.75
43.7

Associated Gene:

Gene:
DLG5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7629889 - 7735803
105915

7629889 - 7735803
105915