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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7647864_7648360_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7647864 - 7648360

Intron Length:
497

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTTTGA

5'SS Class:
major

3'SS Sequence:
GCTTTTGATGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTGCTTTTGATG

Flanking Amino Acid:
SQICHQHLHPSAQHQGRLSL

Intron Amino Acid Position:
1307

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1
69.5
37.4

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
70.5
0.46
1
66
40

Minor 5ss
45.7
-0.5
2.5
59.1
45.3

Minor BPS
55.4
0.02
1.3
58.52
38.1

Associated Gene:

Gene:
DLG5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7629889 - 7735803
105915

7629889 - 7735803
105915