Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7648506_7650487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7648506 - 7650487

Intron Length:

1982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTCTTAAACA

Flanking Amino Acid:

STLYTGSMSSGTVPRSLAPC

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

72.1

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.4

0.51

0.9

69.3

34.7

Minor 5ss

26.5

-2.7

3.2

33.9

42.2

Minor BPS

63.6

0.42

1.7

70.26

42.8

Associated Gene:

Gene:

DLG5

Ensembl Gene ID:

ENSAPLG00000015221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015909

7629889 - 7735803

105915

ENSAPLT00000038035

7629889 - 7735803

105915