Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7650627_7652297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7650627 - 7652297

Intron Length:

1671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAATTT

5'SS Class:

major

3'SS Sequence:

TGTGTTTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTGCCTGTAATC

Flanking Amino Acid:

PVPIPNPALQVQKYTPASEE

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

74.9

36.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.5

0.55

70.3

40.4

Minor 5ss

41.8

-0.9

3.5

64.3

47.2

Minor BPS

48.5

-0.1

58.79

41.2

Associated Gene:

Gene:

DLG5

Ensembl Gene ID:

ENSAPLG00000015221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038035

7629889 - 7735803

105915

ENSAPLT00000015909

7629889 - 7735803

105915