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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7654298_7654615_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7654298 - 7654615

Intron Length:
318

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGTCTA

5'SS Class:
major

3'SS Sequence:
TTTTTGCATGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAT

U12 Branch Point Sequence:
TCTGTTGTAATT

Flanking Amino Acid:
SLSVGDRIIAINGIALDNKS

Intron Amino Acid Position:
842

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1.1
71.3
40.3

Major BPS
84.4
0.85
1.1
84
34.5

Major PPT
78.6
0.64
0.9
74.7
35.3

Minor 5ss
40.7
-1
3.1
60.2
44.1

Minor BPS
49.2
0.02
2.1
69.97
42.5

Associated Gene:

Gene:
DLG5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7629889 - 7735803
105915

7629889 - 7735803
105915