Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7654720_7655161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7654720 - 7655161

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTAAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGTTTTGTAAAT

Flanking Amino Acid:

PLHINVSGHKESGVSLENGV

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.5

0.57

71.5

42.8

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

53.8

0.2

2.1

77.19

39.4

Associated Gene:

Gene:

DLG5

Ensembl Gene ID:

ENSAPLG00000015221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038035

7629889 - 7735803

105915

ENSAPLT00000015909

7629889 - 7735803

105915