Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7656124_7658764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7656124 - 7658764

Intron Length:

2641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TAATATTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTGTTAATAATA

Flanking Amino Acid:

TEVVEFEKDRDDMDLKALGF

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

67.9

39.2

Major BPS

0.75

78.6

Major PPT

68.3

0.41

67.7

42.7

Minor 5ss

34.8

-1.7

2.9

37.7

40.9

Minor BPS

52.7

0.08

1.8

68.97

37.5

Associated Gene:

Gene:

DLG5

Ensembl Gene ID:

ENSAPLG00000015221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015909

7629889 - 7735803

105915

ENSAPLT00000038035

7629889 - 7735803

105915