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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7659764_7660349_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7659764 - 7660349

Intron Length:
586

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAATAAA

5'SS Class:
major

3'SS Sequence:
TTTACTTTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
GCTTCCTTTACT

Flanking Amino Acid:
DKIVAERESIRTLCDNLRRE

Intron Amino Acid Position:
619

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
76.9
33.4

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
77.8
0.63
1
79.2
32.9

Minor 5ss
34.9
-1.7
2.8
42.5
44.5

Minor BPS
74.3
0.85
1.6
85.16
41

Associated Gene:

Gene:
DLG5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7629889 - 7735803
105915

7629889 - 7735803
105915