Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_7673677_7675047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7673677 - 7675047

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TATGCCATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTGCCTCAAAG

Flanking Amino Acid:

EEAAKEADFYHTLHSRLLSD

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

73.8

0.59

1.3

72.8

Major PPT

64.5

0.33

1.1

58.6

41.6

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

59.7

0.17

1.9

69.15

43.9

Associated Gene:

Gene:

DLG5

Ensembl Gene ID:

ENSAPLG00000015221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038035

7629889 - 7735803

105915

ENSAPLT00000015909

7629889 - 7735803

105915