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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7750284_7753219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7750284 - 7753219

Intron Length:

2936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGTAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

AYFGQKDSVCGVSECIIMGI

Intron Amino Acid Position:

1328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

54.9

0.12

1.4

55.4

41.7

Major PPT

84.2

0.77

0.7

76.8

31.8

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799