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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7755492_7756135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7755492 - 7756135

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAC

U12 Branch Point Sequence:

TGTTTTGTGAAG

Flanking Amino Acid:

LQSLKEELPKVVVQGIPEVS

Intron Amino Acid Position:

1185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

54.8

0.12

1.1

47.1

37.6

Major PPT

72.3

0.5

1.1

75.2

38.8

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

45.3

-0.5

2.1

55.23

40.4

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799