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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7757903_7759309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7757903 - 7759309

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAAAA

Flanking Amino Acid:

FLETCRDKYMRAQMEPGSAV

Intron Amino Acid Position:

1010

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.3

0.82

0.7

84.9

29.1

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

62.1

0.38

1.7

77.09

33.2

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799