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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7759393_7759477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7759393 - 7759477

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCATAA

U12 Branch Point Sequence:

CCTTCTCCAACT

Flanking Amino Acid:

YGINDNGTTEPRVLYQLDRI

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

0.37

61.3

Major PPT

0.85

0.7

85.4

28.4

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

52.4

0.15

1.9

72.5

44.6

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799