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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7764397_7765115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7764397 - 7765115

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTTATGTGAAGT

Flanking Amino Acid:

EFKRVLDNIRAVYPCRSEPA

Intron Amino Acid Position:

916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

75.9

0.58

79.9

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

46.3

-0.2

2.4

72.97

43.9

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799