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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7765287_7766775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7765287 - 7766775

Intron Length:

1489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TCCCATTTACCT

Flanking Amino Acid:

VKTAETGYMQRRLVKSLEDL

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

79.6

34.4

Major BPS

66.4

0.41

37.6

Major PPT

85.7

0.8

0.6

85.9

21.2

Minor 5ss

42.8

-0.8

3.2

61.1

43.8

Minor BPS

48.9

-0

1.8

65.66

45.1

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799