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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7766914_7768302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7766914 - 7768302

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCACGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TGCATTTTAACT

Flanking Amino Acid:

SLPHFEKHSKLPAAKGFVAN

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

31.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

72.8

0.51

0.8

69.6

Minor 5ss

-1.9

3.1

42.1

44.5

Minor BPS

67.4

0.63

1.3

76.69

40.1

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799