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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7768422_7769555_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7768422 - 7769555

Intron Length:

1134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCGAG

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TATTCCTCATCA

Flanking Amino Acid:

PLIMALCGSKGSFINISQMI

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

55.9

43.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

87.5

0.84

0.6

22.6

Minor 5ss

47.3

-0.3

63.6

48.1

Minor BPS

64.5

0.45

1.8

77.3

39.3

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799