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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7771006_7771277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7771006 - 7771277

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TGTTTTATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

GATCCTATAATC

Flanking Amino Acid:

RLARLAPVYLSNRGFSIGIG

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

75.5

0.63

1.1

34.4

Major PPT

76.8

0.6

73.3

40.8

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

54.2

0.11

1.6

63.04

35.9

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799