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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7771443_7773438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7771443 - 7773438

Intron Length:

1996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTCTACTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

AAAATATGAATT

Flanking Amino Acid:

KGEDLCYNDSYVTIQNSELM

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

66.6

32.3

Major BPS

0.5

39.8

Major PPT

0.74

0.7

78.3

29.2

Minor 5ss

30.1

-2.3

3.2

40.3

40.2

Minor BPS

46.3

-0.2

1.6

59.58

36.9

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799