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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7773578_7775013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7773578 - 7775013

Intron Length:

1436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

AACTCTGTAACC

Flanking Amino Acid:

VRLPPPAILKPVTLWTGKQV

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

71.9

34.7

Major BPS

62.2

0.3

1.2

38.7

Major PPT

0.54

79.5

32.8

Minor 5ss

34.2

-1.8

2.8

40.2

45.9

Minor BPS

55.3

0.15

65.46

40.4

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799