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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7777617_7778657_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7777617 - 7778657

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGTC

5'SS Class:

major

3'SS Sequence:

GTGTTACTATAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCTTCTGACTT

Flanking Amino Acid:

FIQQRHTQMKRFLKYGNREK

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

70.7

40.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

58.6

0.19

1.2

62.5

42.6

Minor 5ss

41.7

-0.9

3.4

61.2

43.7

Minor BPS

50.9

0.11

1.7

68.72

42.7

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799