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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7778762_7779312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7778762 - 7779312

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTGTTCCTGATT

Flanking Amino Acid:

VAKILTFPEKVNKANINFMR

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.8

38.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.47

39.5

Minor 5ss

30.6

-2.2

44.7

Minor BPS

60.5

0.41

1.6

78.97

37.7

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799