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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7779450_7779633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7779450 - 7779633

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCTA

5'SS Class:

major

3'SS Sequence:

TGTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTTTCTCTAAGA

Flanking Amino Acid:

GFVQRLKGKQGRFRGNLSGK

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

71.8

39.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

89.2

0.88

0.7

88.9

28.2

Minor 5ss

40.2

-1.1

2.7

50.6

45.7

Minor BPS

56.1

0.19

71.45

41.1

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030138

7750135 - 7780885

30751

ENSAPLT00000016630

7750135 - 7784933

34799