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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7780958_7782252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7780958 - 7782252

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

ATGGATTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GATGGCTTAATC

Flanking Amino Acid:

EVESLLGRAQENLNPLVVLN

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.1

0.43

62.6

43.4

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

55.4

0.15

1.9

64.04

41.8

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016630

7750135 - 7784933

34799