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Intron Name: Anas_platyrhynchos_platyrhynchos_6_7784084_7784621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7784084 - 7784621

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTTCTTTCACA

Flanking Amino Acid:

LQYGVLDHRMGTSEKDRPCE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

65.3

0.38

71.6

30.1

Major PPT

91.2

0.93

0.6

87.3

23.1

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

75.9

0.81

1.6

86.93

31.8

Associated Gene:

Gene:

POLR3A

Ensembl Gene ID:

ENSAPLG00000015878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016630

7750135 - 7784933

34799