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Intron Name: Anas_platyrhynchos_platyrhynchos_6_8702031_8702996_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8702031 - 8702996

Intron Length:
966

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAAGAGCG

5'SS Class:
major

3'SS Sequence:
TCTTCCGTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
CTTCCGTTGAAG

Flanking Amino Acid:
QNKDMNQYGPVCSSFQMGPT

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1
63.8
40.9

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
70.8
0.47
1.1
71.3
33.4

Minor 5ss
31.2
-2.1
3.3
40.7
45

Minor BPS
46.9
-0.3
2.3
57.15
44.4

Associated Gene:

Gene:
ZMIZ1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8439055 - 8732374
293320

8651532 - 8731564
80033