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Intron Name: Anas_platyrhynchos_platyrhynchos_6_8746800_8749273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8746800 - 8749273

Intron Length:

2474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCATTTTTATTT

Flanking Amino Acid:

HRVIPSFMCQGGDFTNHNGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.8

86.3

32.1

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

51.4

0.12

1.6

63.14

42.4

Associated Gene:

Gene:

PPIF

Ensembl Gene ID:

ENSAPLG00000002400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002421

8745423 - 8751248

5826