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Intron Name: Anas_platyrhynchos_platyrhynchos_6_8978341_8981416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8978341 - 8981416

Intron Length:

3076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

ATGTCTGTATAC

Flanking Amino Acid:

LVVYLFAMLYSYAEQLFLKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

66.3

0.41

37.5

Major PPT

100

1.12

0.4

100

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

44.5

-0.4

2.2

57.44

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034746

8977484 - 8999440

21957

ENSAPLT00000003776

8977484 - 9005520

28037