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Intron Name: Anas_platyrhynchos_platyrhynchos_6_8988538_8989404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8988538 - 8989404

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACAA

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

TGTGCAATAAAC

Flanking Amino Acid:

VLYLLTSLPQDQQRKGVIVA

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

62.9

37.1

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

81.6

0.71

0.8

80.2

31.9

Minor 5ss

36.7

-1.5

3.1

47.2

48.2

Minor BPS

47.1

-0.2

63.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034746

8977484 - 8999440

21957

ENSAPLT00000019023

8977484 - 8999440

21957

ENSAPLT00000003776

8977484 - 9005520

28037