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Intron Name: Anas_platyrhynchos_platyrhynchos_6_8996978_8997408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8996978 - 8997408

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGTTTTGACA

Flanking Amino Acid:

GKLVDKVVAVREEDILISML

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

77.5

0.62

0.8

34.6

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

68.4

0.57

1.3

77.15

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034746

8977484 - 8999440

21957

ENSAPLT00000019023

8977484 - 8999440

21957

ENSAPLT00000003776

8977484 - 9005520

28037