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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9018597_9018699_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9018597 - 9018699

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGGCGG

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTTTCAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

CTTTTTTTCAAG

Flanking Amino Acid:

AIAFGMILLGWVTLGPSTIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.4

46.1

49.1

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

82.8

0.74

82.6

32.9

Minor 5ss

31.1

-2.2

3.3

34.1

41.8

Minor BPS

49.1

-0.2

1.9

59.29

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040910

9015067 - 9018807

3741