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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9039697_9040263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9039697 - 9040263

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTGAAAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTCTCCTAAAT

Flanking Amino Acid:

RPLGSEDVGQEFVMPKEERQ

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

63.2

0.3

1.1

55.8

42.6

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

61.6

0.44

1.8

83.57

36.5

Associated Gene:

Gene:

BMS1

Ensembl Gene ID:

ENSAPLG00000003759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003906

9032260 - 9054494

22235