Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_9049377_9050361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9049377 - 9050361

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

CTGCATGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATGTCTTTGATC

Flanking Amino Acid:

LAVQSVSGTTPDFRIAATGV

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.1

43.1

Major BPS

0.85

0.9

39.9

Major PPT

72.7

0.51

68.8

41.7

Minor 5ss

42.9

-0.8

3.1

58.1

46.5

Minor BPS

68.9

0.58

1.1

71.13

34.7

Associated Gene:

Gene:

BMS1

Ensembl Gene ID:

ENSAPLG00000003759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003906

9032260 - 9054494

22235