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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9299928_9300398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9299928 - 9300398

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

CTATGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAC

U12 Branch Point Sequence:

TCCCCGTTTATA

Flanking Amino Acid:

NLSISYKLLAAEGMPFRYNE

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

69.3

0.48

1.1

39.5

Major PPT

83.1

0.74

0.9

80.5

36.9

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

45.2

-0.3

2.3

56.1

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004771

9253113 - 9335614

82502