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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9317140_9318409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9317140 - 9318409

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

CTCGTCTTATAG

Flanking Amino Acid:

QVSVDTFKIPEDPKWEFPRK

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

-1.1

42.1

Minor BPS

45.5

-0.4

1.8

47.21

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004771

9253113 - 9335614

82502