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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9332343_9333387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9332343 - 9333387

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCACTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TGTACTTTAACC

Flanking Amino Acid:

ELEKMMVKSRDYLDLAASTP

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

77.3

0.68

79.3

29.4

Major PPT

72.4

0.5

0.8

69.8

36.3

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

76.9

0.82

1.2

80.06

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004771

9253113 - 9335614

82502