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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9377437_9378589_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9377437 - 9378589

Intron Length:

1153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTGTTTTTATAG

Flanking Amino Acid:

CQYRTDFLTVGGFDLEVKGW

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.9

0.63

0.9

72.1

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

47.7

-0.3

1.7

51.23

43.8

Associated Gene:

Gene:

CSGALNACT2

Ensembl Gene ID:

ENSAPLG00000004921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005083

9355994 - 9378882

22889