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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9390673_9392133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9390673 - 9392133

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTACCTCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATTACCT

Flanking Amino Acid:

RLPNGQINFKKFWEISRQIH

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

71.1

0.47

0.9

66.2

34.4

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

64.4

0.53

1.9

86.99

38.2

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005386

9389214 - 9433118

43905

ENSAPLT00000033990

9389214 - 9434400

45187