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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9392326_9392965_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9392326 - 9392965

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCCATAAAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTCCCCATAAAA

Flanking Amino Acid:

VKTAKFDVLEHHMDPSSNFC

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

84.4

0.85

34.5

Major PPT

54.2

0.09

47.8

37.2

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

58.8

0.27

1.8

71.53

39.9

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187

ENSAPLT00000005386

9389214 - 9433118

43905