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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9393444_9395086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9393444 - 9395086

Intron Length:

1643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCCCTATTAACA

Flanking Amino Acid:

SMLVATEICRVVKKKQRTRM

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

71.4

40.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

100

1.12

0.4

100

Minor 5ss

31.1

-2.2

34.5

41.3

Minor BPS

57.6

0.24

1.6

65.34

41.1

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187

ENSAPLT00000005386

9389214 - 9433118

43905