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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9395987_9399266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9395987 - 9399266

Intron Length:

3280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

GCCTTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTTTAGCAATA

Flanking Amino Acid:

IAHRITQCDEENGTVKKIIS

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

68.9

0.42

0.9

68.4

37.4

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

46.3

-0.2

2.3

68.17

38.6

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187

ENSAPLT00000005386

9389214 - 9433118

43905